Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT78523.1 | SIT91440.1 | SAMN05421665_0786 | SAMN05421665_3362 | Hypothetical protein. | Choline dehydrogenase. | 0.747 |
SIT79864.1 | SIT91440.1 | SAMN05421665_1017 | SAMN05421665_3362 | Phenylpropionate dioxygenase, large terminal subunit. | Choline dehydrogenase. | 0.748 |
SIT79953.1 | SIT91440.1 | SAMN05421665_1030 | SAMN05421665_3362 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Choline dehydrogenase. | 0.693 |
SIT82112.1 | SIT91440.1 | SAMN05421665_1388 | SAMN05421665_3362 | Protein of unknown function. | Choline dehydrogenase. | 0.714 |
SIT83626.1 | SIT91440.1 | SAMN05421665_1704 | SAMN05421665_3362 | Hypothetical protein. | Choline dehydrogenase. | 0.714 |
SIT86125.1 | SIT91440.1 | SAMN05421665_2230 | SAMN05421665_3362 | Tetratricopeptide repeat-containing protein. | Choline dehydrogenase. | 0.714 |
SIT88998.1 | SIT91440.1 | SAMN05421665_2849 | SAMN05421665_3362 | Hypothetical protein. | Choline dehydrogenase. | 0.714 |
SIT89345.1 | SIT91440.1 | SAMN05421665_2933 | SAMN05421665_3362 | Tetratricopeptide repeat-containing protein. | Choline dehydrogenase. | 0.714 |
SIT91438.1 | SIT91440.1 | SAMN05421665_3361 | SAMN05421665_3362 | Hypothetical protein. | Choline dehydrogenase. | 0.689 |
SIT91438.1 | SIT91443.1 | SAMN05421665_3361 | SAMN05421665_3363 | Hypothetical protein. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.489 |
SIT91440.1 | SIT78523.1 | SAMN05421665_3362 | SAMN05421665_0786 | Choline dehydrogenase. | Hypothetical protein. | 0.747 |
SIT91440.1 | SIT79864.1 | SAMN05421665_3362 | SAMN05421665_1017 | Choline dehydrogenase. | Phenylpropionate dioxygenase, large terminal subunit. | 0.748 |
SIT91440.1 | SIT79953.1 | SAMN05421665_3362 | SAMN05421665_1030 | Choline dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.693 |
SIT91440.1 | SIT82112.1 | SAMN05421665_3362 | SAMN05421665_1388 | Choline dehydrogenase. | Protein of unknown function. | 0.714 |
SIT91440.1 | SIT83626.1 | SAMN05421665_3362 | SAMN05421665_1704 | Choline dehydrogenase. | Hypothetical protein. | 0.714 |
SIT91440.1 | SIT86125.1 | SAMN05421665_3362 | SAMN05421665_2230 | Choline dehydrogenase. | Tetratricopeptide repeat-containing protein. | 0.714 |
SIT91440.1 | SIT88998.1 | SAMN05421665_3362 | SAMN05421665_2849 | Choline dehydrogenase. | Hypothetical protein. | 0.714 |
SIT91440.1 | SIT89345.1 | SAMN05421665_3362 | SAMN05421665_2933 | Choline dehydrogenase. | Tetratricopeptide repeat-containing protein. | 0.714 |
SIT91440.1 | SIT91438.1 | SAMN05421665_3362 | SAMN05421665_3361 | Choline dehydrogenase. | Hypothetical protein. | 0.689 |
SIT91440.1 | SIT91443.1 | SAMN05421665_3362 | SAMN05421665_3363 | Choline dehydrogenase. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.683 |
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