STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT91538.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SIT87711.1
Hypothetical protein.
  
     0.730
prmA
[LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.713
SIT77826.1
Hypothetical protein.
  
     0.691
SIT75267.1
Protein of unknown function.
  
     0.643
SIT80562.1
Hint domain-containing protein.
  
     0.604
SIT79361.1
Hypothetical protein.
  
     0.578
SIT83050.1
Hint domain-containing protein.
  
     0.577
SIT88314.1
Hypothetical protein.
  
     0.560
SIT91528.1
Major Facilitator Superfamily protein.
 
     0.552
SIT85792.1
Hypothetical protein.
  
     0.543
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.