STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT92008.1PAS domain S-box-containing protein. (615 aa)    
Predicted Functional Partners:
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.925
SIT83899.1
Signal transduction histidine kinase.
   
 0.893
SIT87739.1
PAS/PAC sensor hybrid histidine kinase; Manually curated.
  
 0.891
SIT92013.1
Nitrate/nitrite transport system substrate-binding protein.
 
     0.845
SIT92016.1
Nitrate/nitrite transport system permease protein.
 
     0.777
SIT92020.1
Nitrate/nitrite transport system ATP-binding protein.
 
     0.760
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
 
     0.748
SIT82524.1
Hypothetical protein.
    
 0.738
SIT90377.1
Response regulator receiver domain-containing protein.
    
 0.730
SIT82150.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
    
 0.641
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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