Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN37482.1 | SFN37555.1 | SAMN05660413_00739 | SAMN05660413_00743 | TonB-linked outer membrane protein, SusC/RagA family. | Methylamine utilisation protein MauE. | 0.752 |
SFN37482.1 | SFN37585.1 | SAMN05660413_00739 | SAMN05660413_00745 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.685 |
SFN37482.1 | SFN37598.1 | SAMN05660413_00739 | SAMN05660413_00746 | TonB-linked outer membrane protein, SusC/RagA family. | 7-keto-8-aminopelargonate synthetase. | 0.657 |
SFN37482.1 | SFN37614.1 | SAMN05660413_00739 | SAMN05660413_00747 | TonB-linked outer membrane protein, SusC/RagA family. | RteC protein. | 0.620 |
SFN37482.1 | SFN89737.1 | SAMN05660413_00739 | SAMN05660413_02974 | TonB-linked outer membrane protein, SusC/RagA family. | RteC protein. | 0.620 |
SFN37555.1 | SFN37482.1 | SAMN05660413_00743 | SAMN05660413_00739 | Methylamine utilisation protein MauE. | TonB-linked outer membrane protein, SusC/RagA family. | 0.752 |
SFN37555.1 | SFN37585.1 | SAMN05660413_00743 | SAMN05660413_00745 | Methylamine utilisation protein MauE. | Hypothetical protein. | 0.787 |
SFN37555.1 | SFN37598.1 | SAMN05660413_00743 | SAMN05660413_00746 | Methylamine utilisation protein MauE. | 7-keto-8-aminopelargonate synthetase. | 0.671 |
SFN37555.1 | SFN37614.1 | SAMN05660413_00743 | SAMN05660413_00747 | Methylamine utilisation protein MauE. | RteC protein. | 0.651 |
SFN37555.1 | SFN89737.1 | SAMN05660413_00743 | SAMN05660413_02974 | Methylamine utilisation protein MauE. | RteC protein. | 0.512 |
SFN37585.1 | SFN37482.1 | SAMN05660413_00745 | SAMN05660413_00739 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.685 |
SFN37585.1 | SFN37555.1 | SAMN05660413_00745 | SAMN05660413_00743 | Hypothetical protein. | Methylamine utilisation protein MauE. | 0.787 |
SFN37585.1 | SFN37598.1 | SAMN05660413_00745 | SAMN05660413_00746 | Hypothetical protein. | 7-keto-8-aminopelargonate synthetase. | 0.878 |
SFN37585.1 | SFN37614.1 | SAMN05660413_00745 | SAMN05660413_00747 | Hypothetical protein. | RteC protein. | 0.813 |
SFN37585.1 | SFN89737.1 | SAMN05660413_00745 | SAMN05660413_02974 | Hypothetical protein. | RteC protein. | 0.720 |
SFN37598.1 | SFN37482.1 | SAMN05660413_00746 | SAMN05660413_00739 | 7-keto-8-aminopelargonate synthetase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.657 |
SFN37598.1 | SFN37555.1 | SAMN05660413_00746 | SAMN05660413_00743 | 7-keto-8-aminopelargonate synthetase. | Methylamine utilisation protein MauE. | 0.671 |
SFN37598.1 | SFN37585.1 | SAMN05660413_00746 | SAMN05660413_00745 | 7-keto-8-aminopelargonate synthetase. | Hypothetical protein. | 0.878 |
SFN37598.1 | SFN37614.1 | SAMN05660413_00746 | SAMN05660413_00747 | 7-keto-8-aminopelargonate synthetase. | RteC protein. | 0.857 |
SFN37598.1 | SFN52675.1 | SAMN05660413_00746 | SAMN05660413_01453 | 7-keto-8-aminopelargonate synthetase. | Nucleoside-diphosphate-sugar epimerase. | 0.709 |
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