STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN39588.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
SFN39576.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.848
SFN32272.1
Hypothetical protein.
  
     0.735
SFN52893.1
Aspartyl protease.
  
     0.735
SFN34125.1
Hypothetical protein.
  
     0.728
SFN67241.1
Putative DNA-binding domain-containing protein.
  
     0.718
SFN56143.1
Hypothetical protein.
  
     0.716
SFN27379.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.707
SFN97538.1
Hypothetical protein.
  
     0.694
SFN46925.1
Family of unknown function.
  
     0.689
SFN88830.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Salegentibacter flavus
NCBI taxonomy Id: 287099
Other names: CIP 107843, DSM 17794, KMM 6000, S. flavus, Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016, strain Fg 69
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.