STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN41491.1SprB repeat-containing protein. (170 aa)    
Predicted Functional Partners:
SFN27929.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.607
SFN91127.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.526
SFN27333.1
Hypothetical protein.
    
   0.514
SFN77725.1
WD40-like Beta Propeller Repeat.
 
  0.507
SFN27921.1
Peptidoglycan-associated lipoprotein.
 
  0.506
SFN77739.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.494
SFN33712.1
Lysophospholipase L1.
  
 
  0.491
SFN48287.1
Putative glycoside hydrolase xylanase.
 
  
  0.478
SFN56820.1
Subtilase family protein; Belongs to the peptidase S8 family.
   
  0.474
SFN80449.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
  0.474
Your Current Organism:
Salegentibacter flavus
NCBI taxonomy Id: 287099
Other names: CIP 107843, DSM 17794, KMM 6000, S. flavus, Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016, strain Fg 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.