STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN61516.1Penicillin-binding protein 2. (622 aa)    
Predicted Functional Partners:
SFN61503.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.991
SFN61541.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.968
SFN61560.1
Rod shape-determining protein MreB.
 
 
 
 0.968
SFN29077.1
Cell division protein FtsQ.
 
 
 0.919
SFN29045.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.916
SFN29008.1
Cell division protein FtsI (penicillin-binding protein 3).
  
  
 
0.882
SFN61528.1
Rod shape-determining protein MreD.
 
     0.879
SFN55622.1
Penicillin-binding protein 1A.
  
 
 
 0.791
SFN46027.1
Penicillin-binding protein 1A.
  
 
 0.764
SFN61825.1
Hypothetical protein.
  
 
 0.764
Your Current Organism:
Salegentibacter flavus
NCBI taxonomy Id: 287099
Other names: CIP 107843, DSM 17794, KMM 6000, S. flavus, Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016, strain Fg 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.