STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN67147.1Protein of unknown function DUF58. (297 aa)    
Predicted Functional Partners:
SFN67096.1
Ca-activated chloride channel family protein.
 
    0.963
SFN67111.1
Ca-activated chloride channel family protein.
 
    0.955
SFN67075.1
Tetratricopeptide repeat-containing protein.
 
    0.940
SFN67186.1
ATPase family associated with various cellular activities (AAA).
  
 0.924
SFN67169.1
ATPase family associated with various cellular activities (AAA).
  
 0.919
SFN67056.1
Oxygen tolerance.
 
  
 0.914
SFN67042.1
SH3 domain-containing protein.
 
     0.889
SFN67133.1
Hypothetical protein.
 
    0.887
SFN99691.1
Ca-activated chloride channel family protein.
 
    0.810
SFN93329.1
MoxR-like ATPase.
  
 0.599
Your Current Organism:
Salegentibacter flavus
NCBI taxonomy Id: 287099
Other names: CIP 107843, DSM 17794, KMM 6000, S. flavus, Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016, strain Fg 69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.