STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN68427.1Nucleotide-binding universal stress protein, UspA family. (262 aa)    
Predicted Functional Partners:
SFN68407.1
TrkA-C domain-containing protein.
 
    0.825
pckA-2
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
    0.721
SFN50305.1
Starch-binding associating with outer membrane.
 
     0.624
SFN64268.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.619
SFN50290.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.612
SFN29331.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.598
SFN50341.1
Hypothetical protein.
  
    0.588
SFN56685.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.587
SFN30165.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.577
SFN70689.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.535
Your Current Organism:
Salegentibacter flavus
NCBI taxonomy Id: 287099
Other names: CIP 107843, DSM 17794, KMM 6000, S. flavus, Salegentibacter flavus Ivanova et al. 2006 emend. Hahnke et al. 2016, strain Fg 69
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