STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL3Kirre like nephrin family adhesion molecule 3. (770 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
0.920
LOC107082205
Uncharacterized protein.
      
 0.633
nck2
Cytoplasmic protein.
    
 0.557
nck1
Cytoplasmic protein.
    
 0.557
ENSCVAP00000003828
Proteasome subunit beta.
      
 0.480
LOC107103717
Proteasome subunit beta.
      
 0.480
LOC107087409
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.410
tjp1
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.410
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.