STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr50Melatonin receptor 1C; Belongs to the G-protein coupled receptor 1 family. (352 aa)    
Predicted Functional Partners:
LOC107082726
Solute carrier family 36 member 1.
      
 0.672
fat2
FAT atypical cadherin 2.
      
 0.662
npvf
Neuropeptide VF precursor.
   
  
 0.483
gpr18
G protein-coupled receptor 18; Belongs to the G-protein coupled receptor 1 family.
    
 
0.469
ENSCVAP00000024646
Oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 2.
   
 
 
0.453
LOC107092947
G protein-coupled receptor 183a; Belongs to the G-protein coupled receptor 1 family.
   
 
0.425
LOC107092945
Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family.
   
 
0.425
kcnk10
Potassium channel, subfamily K, member 10b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
    
 
 0.401
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.