STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107093432Myelocytomatosis oncogene homolog. (361 aa)    
Predicted Functional Partners:
myc
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
     
0.910
cdkn2b
Cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4).
   
 0.908
LOC107101186
Mitogen-activated protein kinase.
    
  0.904
mapk1
Mitogen-activated protein kinase.
    
  0.904
zbtb17
Zinc finger and BTB domain containing 17.
    
  0.902
LOC107102162
BHLH domain-containing protein.
     
 
0.900
max
Myc associated factor X.
    
 
 0.693
MAX
MYC associated factor X.
    
 
0.693
ENSCVAP00000027208
E1A binding protein p400.
    
 
 0.518
Ep400
Uncharacterized protein.
    
 
 0.518
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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