STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
romo1Reactive oxygen species modulator 1. (79 aa)    
Predicted Functional Partners:
LOC107091257
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
  
 0.778
LOC107095221
Presequence translocase associated motor 16.
   
  
 0.766
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 
 0.762
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
   0.741
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
  
 0.739
timm21
Uncharacterized protein.
    
 
 0.734
LOC107101648
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
  
 0.731
TOMM7
Translocase of outer mitochondrial membrane 7.
   
  
 0.727
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  
 0.719
ndufb8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.712
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.