Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC107093392DnaJ heat shock protein family (Hsp40) member B1a. (334 aa)    
Predicted Functional Partners:
LOC107105009
Heat shock protein 4a.
 
 0.874
LOC107102065
Heat shock protein 4b.
 
 0.870
stip1
Stress-induced phosphoprotein 1.
   
 0.866
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.853
hspa4l
Heat shock protein 4 like.
 
 0.841
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.839
LOC107087461
Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.
 
 0.827
LOC107083771
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.826
LOC107100718
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.826
HSPA8
Heat shock protein 8; Belongs to the heat shock protein 70 family.
 
 0.825
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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