STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmipGEM interacting protein. (1030 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.575
LOC107085118
Uncharacterized protein.
   
 0.575
rac2
Uncharacterized protein.
   
 0.574
LOC107092536
Rac family small GTPase 1b.
   
 0.574
LOC107087645
Rac family small GTPase 3b.
   
 0.574
LOC107082256
Uncharacterized protein.
   
 0.527
LOC107086129
Uncharacterized protein.
   
 0.527
LOC107099133
Uncharacterized protein.
    
 0.474
LOC107092037
Uncharacterized protein.
    
 0.474
LOC107098535
Ras homolog family member Ca.
    
 0.474
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.