ENSCVAP00000000097 protein (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCVAP00000000097

Uncharacterized protein. (88 aa)

Predicted Functional Partners:

pet100

0.610

LOC107089987

0.543

ALDH18A1

0.543

LOC107087481

0.502

LOC107097497

0.502

atxn1l

0.487

LOC107103784

0.480

LOC107104314

0.480

LOC107102520

0.480

hexd

0.480

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	ENSCVAP00000000097	ENSCVAP00000029640	ENSCVAP00000000097	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.543
ALDH18A1	LOC107089987	ENSCVAP00000029640	ENSCVAP00000006171	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
ENSCVAP00000000097	ALDH18A1	ENSCVAP00000000097	ENSCVAP00000029640	Uncharacterized protein.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.543
ENSCVAP00000000097	LOC107087481	ENSCVAP00000000097	ENSCVAP00000011325	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.502
ENSCVAP00000000097	LOC107089987	ENSCVAP00000000097	ENSCVAP00000006171	Uncharacterized protein.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.543
ENSCVAP00000000097	LOC107097497	ENSCVAP00000000097	ENSCVAP00000031287	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.502
ENSCVAP00000000097	LOC107102520	ENSCVAP00000000097	ENSCVAP00000007729	Uncharacterized protein.	Uncharacterized protein.	0.480
ENSCVAP00000000097	LOC107103784	ENSCVAP00000000097	ENSCVAP00000004316	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	0.480
ENSCVAP00000000097	LOC107104314	ENSCVAP00000000097	ENSCVAP00000005391	Uncharacterized protein.	Uncharacterized protein.	0.480
ENSCVAP00000000097	atxn1l	ENSCVAP00000000097	ENSCVAP00000004117	Uncharacterized protein.	Ataxin 1-like.	0.487
ENSCVAP00000000097	hexd	ENSCVAP00000000097	ENSCVAP00000008900	Uncharacterized protein.	Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing.	0.480
ENSCVAP00000000097	pet100	ENSCVAP00000000097	ENSCVAP00000000099	Uncharacterized protein.	PET100 cytochrome c oxidase chaperone.	0.610
LOC107087481	ENSCVAP00000000097	ENSCVAP00000011325	ENSCVAP00000000097	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Uncharacterized protein.	0.502
LOC107087481	LOC107097497	ENSCVAP00000011325	ENSCVAP00000031287	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.933
LOC107087481	LOC107103784	ENSCVAP00000011325	ENSCVAP00000004316	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	0.428
LOC107087481	LOC107104314	ENSCVAP00000011325	ENSCVAP00000005391	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	Uncharacterized protein.	0.410
LOC107089987	ALDH18A1	ENSCVAP00000006171	ENSCVAP00000029640	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
LOC107089987	ENSCVAP00000000097	ENSCVAP00000006171	ENSCVAP00000000097	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.543
LOC107097497	ENSCVAP00000000097	ENSCVAP00000031287	ENSCVAP00000000097	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Uncharacterized protein.	0.502
LOC107097497	LOC107087481	ENSCVAP00000031287	ENSCVAP00000011325	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.933