STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pet100PET100 cytochrome c oxidase chaperone. (75 aa)    
Predicted Functional Partners:
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
  
 0.852
LOC107087345
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.755
ndufb4
NADH:ubiquinone oxidoreductase subunit B4.
   
  
 0.745
Suox
Sulfite oxidase.
      
 0.661
ENSCVAP00000000097
Uncharacterized protein.
      
 0.610
LOC107086584
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.599
ENSCVAP00000031204
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
      
 0.599
ndufa2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.592
LOC107091257
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
  
 0.575
EFCC1
EF-hand and coiled-coil domain containing 1.
      
 0.557
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.