STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086723Mitogen-activated protein kinase. (363 aa)    
Predicted Functional Partners:
MAP2K6
Mitogen-activated protein kinase kinase 6.
  
0.975
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
  
 
0.974
LOC107090247
Mitogen-activated protein kinase kinase 6.
  
0.974
LOC107102019
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.973
mapkapk5
MAPK activated protein kinase 5.
   
0.964
atf2
Activating transcription factor 2.
    
 0.963
mef2c
Myocyte enhancer factor 2cb.
   
 0.962
LOC107090582
MADS-box domain-containing protein.
   
 0.951
LOC107095820
Ribosomal protein S6 kinase.
   
0.950
tp53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 0.950
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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