Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1160 aa)    
Predicted Functional Partners:
pink1
PTEN induced kinase 1.
      
 0.680
park7
Parkinson protein 7.
     
 0.675
gak
Cyclin G associated kinase.
   
 
 0.637
atxn2
Ataxin 2.
   
  
 0.619
ENSCVAP00000016505
Uncharacterized protein; Belongs to the synuclein family.
   
  
 0.616
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.616
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
  
 0.610
ENSCVAP00000001255
Spatacsin_C domain-containing protein.
      
 0.607
tmem175
Transmembrane protein 175.
      
 0.607
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
      
 0.606
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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