STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098588G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (379 aa)    
Predicted Functional Partners:
LOC107096350
Somatostatin.
   
 0.913
LOC107086887
Cortistatin.
     
 0.761
LOC107096352
Somatostatin 1, tandem duplicate 2.
     
  0.650
LOC107087763
Somatostatin domain-containing protein.
     
  0.650
bbs2
Bardet-Biedl syndrome 2 protein homolog.
     
 0.547
bbs7
Bardet-Biedl syndrome 7.
     
 0.536
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.535
bbs4
Bardet-Biedl syndrome 4.
     
 0.525
bbs1
Bardet-Biedl syndrome 1.
     
 0.517
bbs9
Bardet-Biedl syndrome 9.
     
 0.506
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.