STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
figlaFolliculogenesis specific bHLH transcription factor. (194 aa)    
Predicted Functional Partners:
LOC107083007
Cytochrome P450, family 17, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
    
 
 0.755
ENSCVAP00000029744
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1; Belongs to the 3-beta-HSD family.
      
 0.749
LOC107091520
Bone morphogenetic protein 15.
   
  
 0.670
gata4
GATA binding protein 4.
   
 0.663
ENSCVAP00000007375
TGF_BETA_2 domain-containing protein.
   
  
 0.625
gdf9
Growth differentiation factor 9.
   
  
 0.620
LOC107085369
Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.
    
 
 0.551
spty2d1
SPT2 chromatin protein domain containing 1.
      
 0.549
lhx8
LIM homeobox 8b.
   
 0.546
LOC107089713
Anti-Mullerian hormone.
   
  
 0.544
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.