Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
figlaFolliculogenesis specific bHLH transcription factor. (194 aa)    
Predicted Functional Partners:
LOC107091520
Bone morphogenetic protein 15.
   
  
 0.881
gdf9
Growth differentiation factor 9.
   
  
 0.838
lhx8
LIM homeobox 8b.
   
 0.753
LOC107090590
Uncharacterized protein.
   
 0.753
ENSCVAP00000018108
Homeobox domain-containing protein.
   
 0.748
lhx6
LIM homeobox 6.
   
 0.748
spty2d1
SPT2 chromatin protein domain containing 1.
      
 0.726
ENSCVAP00000013919
Doublesex and mab-3 related transcription factor 1.
      
 0.719
LOC107085413
UEV domain-containing protein.
      
 0.712
ENSCVAP00000029744
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1; Belongs to the 3-beta-HSD family.
      
 0.696
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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