Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSCVAP00000001023Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
irf7
Interferon regulatory factor 7.
  
   
 0.727
LOC107097205
Interferon regulatory factor 3.
      
 0.718
LOC107097259
ISG15 ubiquitin like modifier.
      
 0.687
LOC107103405
CARD_2 domain-containing protein.
      
 0.685
rsad2
Radical S-adenosyl methionine domain containing 2.
      
 0.647
LOC107098985
Cyclic GMP-AMP synthase.
      
 0.606
il10
Interleukin 10.
      
 0.605
IRF1
Interferon regulatory factor.
      
 0.548
ENSCVAP00000017074
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
      
 0.547
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
      
 0.546
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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