Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kcns3Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3b; Belongs to the potassium channel family. (491 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.775
LOC107100232
Si:dkey-43k4.5; Belongs to the potassium channel family.
    
  0.678
lrrtm1
Leucine rich repeat transmembrane neuronal 1.
   
 
 0.593
lpgat1
Lysophosphatidylglycerol acyltransferase 1.
      
 0.591
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.575
LOC107087536
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
   
 0.575
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.575
ENSCVAP00000029359
Aldo_ket_red domain-containing protein.
   
 0.575
ENSCVAP00000031284
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
   
 0.575
rpl21
Ribosomal protein L21.
   
 0.572
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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