Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ccdc103Dynein_attach_N domain-containing protein. (80 aa)    
Predicted Functional Partners:
dnai2
Dynein, axonemal, intermediate chain 2b.
   
 
 0.842
Lrrc6
Leucine rich repeat containing 6.
      
 0.788
zmynd10
Zinc finger, MYND-type containing 10.
   
  
 0.781
ENSCVAP00000021266
Uncharacterized protein.
      
 0.757
RSPH1
Radial spoke head component 1.
   
  
 0.750
dnaaf1
Dynein assembly factor 1, axonemal.
   
  
 0.742
rsph9
Radial spoke head 9 homolog.
   
  
 0.737
ENSCVAP00000021776
Uncharacterized protein.
      
 0.725
ENSCVAP00000028845
Uncharacterized protein.
   
  
 0.725
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.721
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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