Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001057Nuclear receptor domain-containing protein. (91 aa)    
Predicted Functional Partners:
LOC107098566
Uncharacterized protein.
   
 0.792
LOC107103184
Retinoid x receptor, beta b.
   
 0.792
LOC107101420
Uncharacterized protein.
   
 0.792
rxra
Retinoid X receptor, alpha a.
   
 0.792
ENSCVAP00000002779
GPS2_interact domain-containing protein.
    
 0.775
Ncor1
Uncharacterized protein.
    
 0.775
ncor2
Nuclear receptor corepressor 2.
    
 0.775
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.775
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
   
 0.761
LOC107093901
Nuclear receptor coactivator 3.
    
 0.744
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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