STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107087256Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
LOC107086750
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
   
 0.927
LOC107082129
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
   
 0.927
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
    
 0.925
c1galt1c1
C1GALT1-specific chaperone 1.
    
 0.923
C1galt1
Si:dkey-202e17.1.
   
 0.918
LOC107089181
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
 
 0.915
LOC107089188
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
 
 0.915
LOC107090356
Si:dkeyp-87d8.8.
  
  
 
0.904
Gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
  
  
 
0.904
galnt12
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.779
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.