Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107087256Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
LOC107086750
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
    
 0.953
LOC107082129
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
    
 0.953
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
    
 0.941
c1galt1c1
C1GALT1-specific chaperone 1.
    
 0.940
LOC107091485
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.937
LOC107093984
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.931
ST6GALNAC2
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
     
 0.931
LOC107089181
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.927
LOC107089188
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.927
LOC107088933
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.927
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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