STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001127Protein kinase domain-containing protein. (296 aa)    
Predicted Functional Partners:
ENSCVAP00000023282
DH domain-containing protein.
 
  
   0.872
ENSCVAP00000030732
Uncharacterized protein.
 
  
   0.764
LOC107091851
Trio Rho guanine nucleotide exchange factor a.
 
  
   0.684
LOC107091989
Receptor-interacting serine-threonine kinase 3.
  
 
 0.663
LOC107082256
Uncharacterized protein.
   
 0.649
LOC107086129
Uncharacterized protein.
   
 0.649
LOC107099133
Uncharacterized protein.
   
 0.649
Rhoh
Ras homolog family member H.
   
 0.649
rnd3
Rho family GTPase 3a.
   
 0.649
rhobtb2
Rho related BTB domain containing 2a.
   
 0.649
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.