STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098579Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
LOC107100721
Torsin.
   
 
 0.807
tor2a
Torsin family 2, member A.
   
 
 0.681
ENSCVAP00000012554
Uncharacterized protein.
      
 0.623
cep350
Centrosomal protein 350.
      
 0.616
tor3a
Torsin family 3, member A.
   
 
 0.588
LOC107082616
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.570
LOC107083026
PID domain-containing protein.
      
 0.570
ENSCVAP00000024168
Nitric oxide synthase 1 (neuronal) adaptor protein b.
      
 0.570
LOC107089753
Si:dkey-34e4.1.
      
 0.570
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.568
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.