STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egfEpidermal growth factor. (962 aa)    
Predicted Functional Partners:
erbb2
Receptor protein-tyrosine kinase.
   
 0.922
LOC107098892
Receptor protein-tyrosine kinase.
   
 0.903
egfr
Receptor protein-tyrosine kinase.
   
 0.903
grb2
Growth factor receptor-bound protein 2b.
     
 0.822
LOC107101915
Transforming growth factor, alpha.
     
 0.821
btc
EGF-like domain-containing protein.
     
 0.816
ereg
EGF-like domain-containing protein.
    
 0.812
ENSCVAP00000030679
IlGF domain-containing protein; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
     
 0.804
erbb3
Protein kinase domain-containing protein.
   
 0.792
LOC107084231
Receptor protein-tyrosine kinase.
   
 0.792
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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