Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tom1Target of myb1 membrane trafficking protein. (219 aa)    
Predicted Functional Partners:
tollip
Toll interacting protein.
   
 
 0.833
LOC107101489
Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.716
myo6
Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.716
cuedc1
CUE domain containing 1b.
    
   0.685
LOC107090869
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.592
ENSCVAP00000018217
Uncharacterized protein.
    
 0.592
arl15
ADP-ribosylation factor-like 15a.
    
 0.592
zfyve9
Zinc finger, FYVE domain containing 9a.
    
 
 0.548
rps27a
Ribosomal protein S27a.
    
   0.515
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.515
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.