STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobll1Cobl domain-containing protein. (1006 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.541
LOC107088092
GRB2 related adaptor protein a.
    
 0.541
LOC107086417
GRB2 related adaptor protein b.
    
 0.541
LOC107082021
GRB2 related adaptor protein 2a.
    
 0.541
wdr90
WD repeat domain 90.
    
  0.493
mst1r
Macrophage stimulating 1 receptor b.
    
 0.483
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.483
LOC107097508
Macrophage stimulating 1 receptor a.
    
 0.483
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.441
SHC3
SHC adaptor protein 3.
    
 0.441
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.