STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107084967Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (966 aa)    
Predicted Functional Partners:
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.986
pi4ka
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
    
0.945
LOC107093768
Phosphatidylinositol 4-kinase type 2 beta.
    
 0.938
pi4k2a
Phosphatidylinositol 4-kinase type 2 alpha.
    
 0.938
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
0.932
ENSCVAP00000015204
SAC1 like phosphatidylinositide phosphatase a.
    
 0.928
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.928
synj1
Synaptojanin 1.
    
 0.926
inpp5b
Inositol polyphosphate-5-phosphatase B.
   
 
 0.916
inpp5e
Inositol polyphosphate-5-phosphatase E.
   
 
 0.913
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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