Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC107086668BTB domain-containing protein. (621 aa)    
Predicted Functional Partners:
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.795
cops5
COP9 signalosome subunit 5.
    
  0.741
cops2
COP9 signalosome subunit 2.
    
 0.737
gps1
G protein pathway suppressor 1.
   
  0.727
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.723
LOC107099750
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.721
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.721
cops3
COP9 signalosome subunit 3.
    
  0.720
ENSCVAP00000006722
COP9 signalosome subunit 8.
    
  0.685
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.673
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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