rprd1b protein (Cyprinodon variegatus) - STRING interaction network

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Score

rprd1b

Regulation of nuclear pre-mRNA domain containing 1B. (329 aa)

Predicted Functional Partners:

polr2b

0.954

xrn2

0.935

DXO

0.927

polr2a

0.922

ENSCVAP00000006489

0.903

rpap2

0.874

polr2i

0.805

polr2g

0.800

polr2d

0.796

polr2f

0.786

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DXO	rpap2	ENSCVAP00000016165	ENSCVAP00000003730	Decapping exoribonuclease.	RTR1-type domain-containing protein.	0.494
DXO	rprd1b	ENSCVAP00000016165	ENSCVAP00000001208	Decapping exoribonuclease.	Regulation of nuclear pre-mRNA domain containing 1B.	0.927
DXO	xrn2	ENSCVAP00000016165	ENSCVAP00000015966	Decapping exoribonuclease.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.996
ENSCVAP00000006489	polr2b	ENSCVAP00000006489	ENSCVAP00000006138	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.981
ENSCVAP00000006489	polr2d	ENSCVAP00000006489	ENSCVAP00000000422	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.974
ENSCVAP00000006489	polr2f	ENSCVAP00000006489	ENSCVAP00000008607	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.974
ENSCVAP00000006489	polr2g	ENSCVAP00000006489	ENSCVAP00000017932	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.974
ENSCVAP00000006489	polr2i	ENSCVAP00000006489	ENSCVAP00000012383	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.878
ENSCVAP00000006489	rpap2	ENSCVAP00000006489	ENSCVAP00000003730	Uncharacterized protein.	RTR1-type domain-containing protein.	0.960
ENSCVAP00000006489	rprd1b	ENSCVAP00000006489	ENSCVAP00000001208	Uncharacterized protein.	Regulation of nuclear pre-mRNA domain containing 1B.	0.903
ENSCVAP00000006489	xrn2	ENSCVAP00000006489	ENSCVAP00000015966	Uncharacterized protein.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.549
polr2a	polr2b	ENSCVAP00000003901	ENSCVAP00000006138	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
polr2a	polr2d	ENSCVAP00000003901	ENSCVAP00000000422	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.987
polr2a	polr2f	ENSCVAP00000003901	ENSCVAP00000008607	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
polr2a	polr2g	ENSCVAP00000003901	ENSCVAP00000017932	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.999
polr2a	polr2i	ENSCVAP00000003901	ENSCVAP00000012383	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
polr2a	rpap2	ENSCVAP00000003901	ENSCVAP00000003730	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RTR1-type domain-containing protein.	0.960
polr2a	rprd1b	ENSCVAP00000003901	ENSCVAP00000001208	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Regulation of nuclear pre-mRNA domain containing 1B.	0.922
polr2a	xrn2	ENSCVAP00000003901	ENSCVAP00000015966	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.549
polr2b	ENSCVAP00000006489	ENSCVAP00000006138	ENSCVAP00000006489	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.981