rprd1b protein (Cyprinodon variegatus) - STRING interaction network

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Score

rprd1b

Regulation of nuclear pre-mRNA domain containing 1B. (329 aa)

Predicted Functional Partners:

rpap2

0.947

polr2a

0.925

polr2b

0.913

polr2i

0.903

POLR2E

0.902

polr2d

0.901

polr2f

0.901

polr2g

0.897

polr2l

0.895

Gpn1

0.892

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gpn1	POLR2E	ENSCVAP00000020423	ENSCVAP00000016892	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II subunit E.	0.967
Gpn1	polr2a	ENSCVAP00000020423	ENSCVAP00000003901	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.917
Gpn1	polr2b	ENSCVAP00000020423	ENSCVAP00000006138	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.972
Gpn1	polr2d	ENSCVAP00000020423	ENSCVAP00000000422	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.908
Gpn1	polr2f	ENSCVAP00000020423	ENSCVAP00000008607	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.946
Gpn1	polr2g	ENSCVAP00000020423	ENSCVAP00000017932	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.968
Gpn1	polr2l	ENSCVAP00000020423	ENSCVAP00000005930	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.946
Gpn1	rpap2	ENSCVAP00000020423	ENSCVAP00000003730	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RTR1-type domain-containing protein.	0.992
Gpn1	rprd1b	ENSCVAP00000020423	ENSCVAP00000001208	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Regulation of nuclear pre-mRNA domain containing 1B.	0.892
POLR2E	Gpn1	ENSCVAP00000016892	ENSCVAP00000020423	RNA polymerase II subunit E.	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	0.967
POLR2E	polr2a	ENSCVAP00000016892	ENSCVAP00000003901	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr2b	ENSCVAP00000016892	ENSCVAP00000006138	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr2d	ENSCVAP00000016892	ENSCVAP00000000422	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
POLR2E	polr2f	ENSCVAP00000016892	ENSCVAP00000008607	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
POLR2E	polr2g	ENSCVAP00000016892	ENSCVAP00000017932	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.999
POLR2E	polr2i	ENSCVAP00000016892	ENSCVAP00000012383	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
POLR2E	polr2l	ENSCVAP00000016892	ENSCVAP00000005930	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.999
POLR2E	rpap2	ENSCVAP00000016892	ENSCVAP00000003730	RNA polymerase II subunit E.	RTR1-type domain-containing protein.	0.992
POLR2E	rprd1b	ENSCVAP00000016892	ENSCVAP00000001208	RNA polymerase II subunit E.	Regulation of nuclear pre-mRNA domain containing 1B.	0.902
polr2a	Gpn1	ENSCVAP00000003901	ENSCVAP00000020423	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	0.917