Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086656Hairy-related 12. (156 aa)    
Predicted Functional Partners:
neurod1
Neurogenic differentiation factor.
    
 0.666
neurog1
Neurogenin 1.
    
 0.628
ENSCVAP00000022525
Neurogenin 3.
    
 0.614
hand2
Heart and neural crest derivatives expressed 2.
    
 0.588
atoh7
Atonal bHLH transcription factor 7.
    
 
 0.585
Ascl1
Achaete-scute family bHLH transcription factor 1a.
   
 0.574
atoh1
Atonal bHLH transcription factor 1a.
    
 
 0.535
olig2
Oligodendrocyte lineage transcription factor 2.
    
 0.492
ENSCVAP00000007008
Achaete-scute family bHLH transcription factor 1b.
   
 0.488
nol9
Nucleolar protein 9.
      
 0.469
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.