Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam32aFamily with sequence similarity 32 member A. (96 aa)    
Predicted Functional Partners:
cwc22
CWC22 spliceosome associated protein homolog.
    
  0.997
slu7
SLU7 homolog, splicing factor.
   
 0.997
sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.994
prkrip1
PRKR interacting protein 1.
     
 0.994
cactin
Cactin.
    
 0.994
nkap
NFKB activating protein.
    
 0.992
syf2
SYF2 pre-mRNA-splicing factor.
   
 0.987
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.986
ENSCVAP00000009384
Coiled-coil domain containing 12.
   
 0.985
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.983
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.