STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107087240Gonadotropin releasing hormone receptor 4. (413 aa)    
Predicted Functional Partners:
gnrh2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
     
 0.980
LOC107081798
Uncharacterized protein.
     
 0.972
LOC107093582
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
     
 0.949
LOC107100829
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.946
LOC107097118
Uncharacterized protein.
    
 0.946
GNAS
GNAS complex locus.
    
 0.924
LOC107103230
GNAS complex locus.
    
 0.924
LOC107088987
Uncharacterized protein.
    
  0.914
LOC107088982
Uncharacterized protein.
    
  0.914
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
     
 0.673
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.