LOC107097314 protein (Cyprinodon variegatus)

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

LOC107097314

Scaffold attachment factor B. (745 aa)

Predicted Functional Partners:

prpf38a

0.583

Snrnp70

0.543

ncbp2

0.528

sumo1

0.511

sumo2

0.495

LOC107096192

0.495

LOC107087147

0.495

ENSCVAP00000006947

0.495

ENSCVAP00000031585

0.495

Ngdn

0.483

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000006947	LOC107097314	ENSCVAP00000006947	ENSCVAP00000001265	Rad60-SLD domain-containing protein.	Scaffold attachment factor B.	0.495
ENSCVAP00000006947	sumo1	ENSCVAP00000006947	ENSCVAP00000009217	Rad60-SLD domain-containing protein.	Small ubiquitin-related modifier.	0.634
ENSCVAP00000031585	LOC107097314	ENSCVAP00000031585	ENSCVAP00000001265	Uncharacterized protein.	Scaffold attachment factor B.	0.495
ENSCVAP00000031585	sumo1	ENSCVAP00000031585	ENSCVAP00000009217	Uncharacterized protein.	Small ubiquitin-related modifier.	0.634
LOC107087147	LOC107097314	ENSCVAP00000003265	ENSCVAP00000001265	Small ubiquitin-related modifier.	Scaffold attachment factor B.	0.495
LOC107087147	sumo1	ENSCVAP00000003265	ENSCVAP00000009217	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.645
LOC107096192	LOC107097314	ENSCVAP00000002294	ENSCVAP00000001265	Small ubiquitin-related modifier.	Scaffold attachment factor B.	0.495
LOC107096192	sumo1	ENSCVAP00000002294	ENSCVAP00000009217	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.645
LOC107097314	ENSCVAP00000006947	ENSCVAP00000001265	ENSCVAP00000006947	Scaffold attachment factor B.	Rad60-SLD domain-containing protein.	0.495
LOC107097314	ENSCVAP00000031585	ENSCVAP00000001265	ENSCVAP00000031585	Scaffold attachment factor B.	Uncharacterized protein.	0.495
LOC107097314	LOC107087147	ENSCVAP00000001265	ENSCVAP00000003265	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.495
LOC107097314	LOC107096192	ENSCVAP00000001265	ENSCVAP00000002294	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.495
LOC107097314	Ngdn	ENSCVAP00000001265	ENSCVAP00000002103	Scaffold attachment factor B.	Neuroguidin, EIF4E binding protein.	0.483
LOC107097314	Snrnp70	ENSCVAP00000001265	ENSCVAP00000002768	Scaffold attachment factor B.	Small nuclear ribonucleoprotein 70 (U1).	0.543
LOC107097314	ncbp2	ENSCVAP00000001265	ENSCVAP00000010612	Scaffold attachment factor B.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.528
LOC107097314	prpf38a	ENSCVAP00000001265	ENSCVAP00000010220	Scaffold attachment factor B.	Pre-mRNA processing factor 38A.	0.583
LOC107097314	sumo1	ENSCVAP00000001265	ENSCVAP00000009217	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.511
LOC107097314	sumo2	ENSCVAP00000001265	ENSCVAP00000002000	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.495
Ngdn	LOC107097314	ENSCVAP00000002103	ENSCVAP00000001265	Neuroguidin, EIF4E binding protein.	Scaffold attachment factor B.	0.483
Snrnp70	LOC107097314	ENSCVAP00000002768	ENSCVAP00000001265	Small nuclear ribonucleoprotein 70 (U1).	Scaffold attachment factor B.	0.543