LOC107097314 protein (Cyprinodon variegatus)

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Score

LOC107097314

Scaffold attachment factor B. (745 aa)

Predicted Functional Partners:

LOC107081441

0.835

ERH

0.835

ncbp2

0.781

LOC107095679

0.643

Hnrnpul1

0.643

ENSCVAP00000007759

0.643

HNRNPUL1

0.643

ENSCVAP00000013352

0.635

rnf4

0.632

brix1

0.610

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000007759	LOC107097314	ENSCVAP00000007759	ENSCVAP00000001265	Uncharacterized protein.	Scaffold attachment factor B.	0.643
ENSCVAP00000007759	ncbp2	ENSCVAP00000007759	ENSCVAP00000010612	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.714
ENSCVAP00000013352	LOC107097314	ENSCVAP00000013352	ENSCVAP00000001265	Zinc finger CCCH-type containing 18.	Scaffold attachment factor B.	0.635
ENSCVAP00000013352	ncbp2	ENSCVAP00000013352	ENSCVAP00000010612	Zinc finger CCCH-type containing 18.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.984
ERH	LOC107097314	ENSCVAP00000028842	ENSCVAP00000001265	ERH mRNA splicing and mitosis factor.	Scaffold attachment factor B.	0.835
HNRNPUL1	LOC107097314	ENSCVAP00000025025	ENSCVAP00000001265	Heterogeneous nuclear ribonucleoprotein U like 1.	Scaffold attachment factor B.	0.643
HNRNPUL1	ncbp2	ENSCVAP00000025025	ENSCVAP00000010612	Heterogeneous nuclear ribonucleoprotein U like 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.714
Hnrnpul1	LOC107097314	ENSCVAP00000007745	ENSCVAP00000001265	SAP domain-containing protein.	Scaffold attachment factor B.	0.643
Hnrnpul1	ncbp2	ENSCVAP00000007745	ENSCVAP00000010612	SAP domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.714
LOC107081441	LOC107097314	ENSCVAP00000000835	ENSCVAP00000001265	Enhancer of rudimentary homolog; May have a role in the cell cycle.	Scaffold attachment factor B.	0.835
LOC107095679	LOC107097314	ENSCVAP00000002952	ENSCVAP00000001265	Heterogeneous nuclear ribonucleoprotein Ub.	Scaffold attachment factor B.	0.643
LOC107095679	ncbp2	ENSCVAP00000002952	ENSCVAP00000010612	Heterogeneous nuclear ribonucleoprotein Ub.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.714
LOC107097314	ENSCVAP00000007759	ENSCVAP00000001265	ENSCVAP00000007759	Scaffold attachment factor B.	Uncharacterized protein.	0.643
LOC107097314	ENSCVAP00000013352	ENSCVAP00000001265	ENSCVAP00000013352	Scaffold attachment factor B.	Zinc finger CCCH-type containing 18.	0.635
LOC107097314	ERH	ENSCVAP00000001265	ENSCVAP00000028842	Scaffold attachment factor B.	ERH mRNA splicing and mitosis factor.	0.835
LOC107097314	HNRNPUL1	ENSCVAP00000001265	ENSCVAP00000025025	Scaffold attachment factor B.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.643
LOC107097314	Hnrnpul1	ENSCVAP00000001265	ENSCVAP00000007745	Scaffold attachment factor B.	SAP domain-containing protein.	0.643
LOC107097314	LOC107081441	ENSCVAP00000001265	ENSCVAP00000000835	Scaffold attachment factor B.	Enhancer of rudimentary homolog; May have a role in the cell cycle.	0.835
LOC107097314	LOC107095679	ENSCVAP00000001265	ENSCVAP00000002952	Scaffold attachment factor B.	Heterogeneous nuclear ribonucleoprotein Ub.	0.643
LOC107097314	brix1	ENSCVAP00000001265	ENSCVAP00000014316	Scaffold attachment factor B.	Brix domain containing 2.	0.610