STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107097308PLAT domain-containing protein. (497 aa)    
Predicted Functional Partners:
LOC107097322
Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.
  
  
 
0.903
lipg
Lipase, endothelial.
  
  
 
0.903
lipc
Lipase, hepatic a.
  
  
 
0.902
ENSCVAP00000000391
DAGKa domain-containing protein.
     
  0.900
LOC107096166
Diacylglycerol kinase.
     
  0.900
dgka
Diacylglycerol kinase.
     
  0.900
LOC107097906
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
  0.900
DGKQ
Diacylglycerol kinase.
     
  0.900
LOC107088750
Diacylglycerol kinase.
     
  0.900
LOC107101198
PNPLA domain-containing protein.
     
  0.900
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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