Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC107094618Cytochrome P450, family 2, subfamily U, polypeptide 1. (439 aa)    
Predicted Functional Partners:
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.933
LOC107091208
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.916
LOC107091209
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.916
LOC107084159
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.916
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
   
 0.915
LOC107083604
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
   
 0.915
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
   
 0.915
aldh2
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
   
 0.915
LOC107095777
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 
0.912
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
  0.912
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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