STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dkk2Dickkopf WNT signaling pathway inhibitor 2. (242 aa)    
Predicted Functional Partners:
lrp6
Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.
    
 0.948
LOC107096737
Low density lipoprotein receptor-related protein 5.
    
 0.948
dkk1
Dickkopf WNT signaling pathway inhibitor 1a.
     
0.945
kremen1
Kringle containing transmembrane protein 1.
    
 0.646
ENSCVAP00000017040
HMG box domain-containing protein.
      
 0.540
ENSCVAP00000003171
Uncharacterized protein.
     
 0.514
CENPS
Centromere protein S.
    
 0.410
LOC107086887
Cortistatin.
    
 0.410
wscd1
WSC domain containing 1b.
    
 0.410
wscd2
WSC domain containing 2.
    
 0.410
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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