STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107096269Agouti domain-containing protein. (141 aa)    
Predicted Functional Partners:
LOC107084912
Agouti domain-containing protein.
     
  0.900
ENSCVAP00000003353
Melanocortin 4 receptor.
    
 
 0.720
LOC107096024
Proopiomelanocortin.
      
 0.664
LOC107084355
Neuropeptide Y.
      
 0.663
LOC107089253
Uncharacterized protein.
      
 0.662
crh
Corticotropin releasing hormone b.
      
 0.628
lepr
Leptin receptor.
      
 0.614
LOC107083139
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
      
 0.598
ENSCVAP00000015628
Agouti signaling protein, nonagouti homolog (mouse) 2b.
  
   
 0.593
nos1
Nitric oxide synthase; Produces nitric oxide (NO).
      
 0.589
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.