STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tax1bp3Tax1 (human T-cell leukemia virus type I) binding protein 3. (128 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.722
dnajc22
DnaJ (Hsp40) homolog, subfamily C, member 22.
      
 0.669
LOC107101293
Uncharacterized protein.
   
 
 0.586
LOC107090777
Junction plakoglobin a.
   
 
 0.586
rtkn
Rhotekin.
    
  0.569
LOC107086919
Rhotekin 2a.
    
  0.569
ENSCVAP00000020584
Rhotekin 2b.
    
  0.521
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
      
 0.485
LOC107099133
Uncharacterized protein.
   
 
 0.439
LOC107092037
Uncharacterized protein.
   
 
 0.439
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.