LOC107094621 protein (Cyprinodon variegatus)

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second shell of interactors

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Knowledge-based Evidence

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textmining

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC107094621

Uncharacterized protein. (967 aa)

Predicted Functional Partners:

ENSCVAP00000005887

0.856

crnkl1

0.664

RAB17

0.614

rab5a

0.614

rab5c

0.614

LOC107082990

0.614

LOC107102771

0.614

LOC107099752

0.614

LOC107081922

0.613

rabgef1

0.613

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000005887	LOC107094621	ENSCVAP00000005887	ENSCVAP00000001339	XPGI domain-containing protein.	Uncharacterized protein.	0.856
LOC107081922	LOC107082990	ENSCVAP00000003317	ENSCVAP00000016312	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB5A, member RAS oncogene family, b.	0.986
LOC107081922	LOC107094621	ENSCVAP00000003317	ENSCVAP00000001339	RAB guanine nucleotide exchange factor (GEF) 1, like.	Uncharacterized protein.	0.613
LOC107081922	LOC107099752	ENSCVAP00000003317	ENSCVAP00000018173	RAB guanine nucleotide exchange factor (GEF) 1, like.	Uncharacterized protein.	0.986
LOC107081922	LOC107102771	ENSCVAP00000003317	ENSCVAP00000016927	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB5B, member RAS oncogene family.	0.986
LOC107081922	RAB17	ENSCVAP00000003317	ENSCVAP00000006445	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB17, member RAS oncogene family.	0.872
LOC107081922	rab5a	ENSCVAP00000003317	ENSCVAP00000006651	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB5A, member RAS oncogene family, a.	0.986
LOC107081922	rab5c	ENSCVAP00000003317	ENSCVAP00000007843	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB5C, member RAS oncogene family.	0.986
LOC107081922	rabgef1	ENSCVAP00000003317	ENSCVAP00000004032	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB guanine nucleotide exchange factor (GEF) 1.	0.951
LOC107082990	LOC107081922	ENSCVAP00000016312	ENSCVAP00000003317	RAB5A, member RAS oncogene family, b.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.986
LOC107082990	LOC107094621	ENSCVAP00000016312	ENSCVAP00000001339	RAB5A, member RAS oncogene family, b.	Uncharacterized protein.	0.614
LOC107082990	rabgef1	ENSCVAP00000016312	ENSCVAP00000004032	RAB5A, member RAS oncogene family, b.	RAB guanine nucleotide exchange factor (GEF) 1.	0.986
LOC107094621	ENSCVAP00000005887	ENSCVAP00000001339	ENSCVAP00000005887	Uncharacterized protein.	XPGI domain-containing protein.	0.856
LOC107094621	LOC107081922	ENSCVAP00000001339	ENSCVAP00000003317	Uncharacterized protein.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.613
LOC107094621	LOC107082990	ENSCVAP00000001339	ENSCVAP00000016312	Uncharacterized protein.	RAB5A, member RAS oncogene family, b.	0.614
LOC107094621	LOC107099752	ENSCVAP00000001339	ENSCVAP00000018173	Uncharacterized protein.	Uncharacterized protein.	0.614
LOC107094621	LOC107102771	ENSCVAP00000001339	ENSCVAP00000016927	Uncharacterized protein.	RAB5B, member RAS oncogene family.	0.614
LOC107094621	RAB17	ENSCVAP00000001339	ENSCVAP00000006445	Uncharacterized protein.	RAB17, member RAS oncogene family.	0.614
LOC107094621	crnkl1	ENSCVAP00000001339	ENSCVAP00000028240	Uncharacterized protein.	Crooked neck pre-mRNA splicing factor 1.	0.664
LOC107094621	rab5a	ENSCVAP00000001339	ENSCVAP00000006651	Uncharacterized protein.	RAB5A, member RAS oncogene family, a.	0.614