STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bicraBRD4 interacting chromatin remodeling complex associated protein. (1764 aa)    
Predicted Functional Partners:
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.952
anapc5
Anaphase promoting complex subunit 5.
   
 0.952
anapc7
Anaphase promoting complex subunit 7.
   
 0.941
anapc4
Anaphase promoting complex subunit 4.
   
 0.926
cdc27
Cell division cycle 27.
  
 0.916
anapc1
Anaphase promoting complex subunit 1.
   
 0.910
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
   
 0.910
anapc13
Anaphase promoting complex subunit 13.
    
 0.902
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
    
 0.888
cdc26
Cell division cycle 26 homolog.
    
 0.881
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.