STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107091218Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. (370 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.705
slc35b3
Solute carrier family 35 member B3.
   
 
 0.667
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.577
ENSCVAP00000002715
APC membrane recruitment protein 2.
    
 0.566
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
     
 0.516
ENSCVAP00000026335
Uncharacterized protein.
     
 0.516
flad1
Flavin adenine dinucleotide synthetase 1.
   
 0.513
slc35b2
Solute carrier family 35 member B2.
   
 
 0.508
Tep1
Uncharacterized protein.
   
 0.497
ENSCVAP00000015184
TROVE domain-containing protein.
   
 0.497
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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