STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LOC107105005Malonyl CoA:ACP acyltransferase (mitochondrial). (370 aa)    
Predicted Functional Partners:
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.996
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.994
acaca
Acetyl-CoA carboxylase alpha.
  
 
 0.957
LOC107100048
Acetyl-CoA carboxylase beta.
  
 
 0.957
fasn
Coiled-coil domain containing 57.
  
 
0.948
palb2
PALB2_WD40 domain-containing protein.
  
 0.948
eral1
Era-like 12S mitochondrial rRNA chaperone 1.
  
 
 0.939
ACSF3
Acyl-CoA synthetase family member 3.
  
 
 0.929
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.922
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
  
 
 0.869
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.