Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (201 aa)    
Predicted Functional Partners:
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.880
pnisr
PNN-interacting serine/arginine-rich protein.
   
 
 0.857
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.855
srsf10
Serine and arginine rich splicing factor 10.
   
 0.845
PNN
Pinin, desmosome associated protein.
   
 
 0.837
LOC107103540
Uncharacterized protein.
   
 
 0.826
LOC107097557
RNA binding motif protein 39b.
   
 
 0.826
Zranb2
RanBP2-type domain-containing protein.
   
 0.803
Srrm1
PWI domain-containing protein.
   
 0.797
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.793
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]