Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107090663Sprouty related EVH1 domain containing 3. (522 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1b.
    
 0.663
nudt6
Nudix (nucleoside diphosphate linked moiety X)-type motif 6.
      
 0.626
sphkap
SPHK1 interactor, AKAP domain containing.
      
 0.610
LOC107081919
Zgc:153119.
      
 0.609
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
      
 0.608
kctd14
Potassium channel tetramerization domain containing 14.
      
 0.604
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
      
 0.555
ENSCVAP00000018988
Uncharacterized protein.
      
 0.548
LOC107094466
Estrogen-related receptor gamma b.
      
 0.543
slitrk3
SLIT and NTRK-like family, member 3a.
     
 0.538
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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