STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107090663Sprouty related EVH1 domain containing 3. (522 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1b.
    
 0.680
nek2
NIMA-related kinase 2.
    
 0.651
psmb1
Proteasome subunit beta.
   
 
  0.473
psmb2
Proteasome subunit beta.
   
 
  0.473
psmb3
Proteasome subunit beta.
   
 
  0.473
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
      
 0.465
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
 
  0.460
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
 
  0.458
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
 
  0.456
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 
  0.454
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.