STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem65Transmembrane protein 65. (249 aa)    
Predicted Functional Partners:
tax1bp3
Tax1 (human T-cell leukemia virus type I) binding protein 3.
    
   0.595
acaa2
Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
    
   0.594
cfdp1
Craniofacial development protein 1; May play a role during embryogenesis.
   
  
 0.507
cnppd1
Cyclin Pas1/PHO80 domain containing 1.
   
  
 0.494
cetn3
Centrin 3.
   
  
 0.476
elmod3
ELMO/CED-12 domain containing 3.
      
 0.458
LOC107098485
Receptor expression-enhancing protein.
      
 0.415
LOC107086584
Cytochrome c oxidase assembly homolog 15 (yeast).
    
   0.413
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.409
sepsecs
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.402
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.